Identification of the T-DNA Flanking Sequences and Event-Specific PCR Detection of Transgenic Rice‘Jishengjing 2'
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摘要:
利用染色体步移方法从转基因水稻吉生粳2号基因组中分离了外源基因T-DNA整合左边界旁侧序列,长度为297 bp。通过对左边界旁侧序列的同源性比对分析定位了外源基因T-DNA在吉生粳2号基因组中的整合位点,为水稻基因组第1号染色体的第41 607 441 bp处(Gen Bank sequence ID:NC_008394.4)。依据整合位点右侧设计的1条引物和TDNA右边界设计的3条引物分别进行PCR扩增分离到了右边界旁侧序列。根据左边界旁侧序列和T-DNA整合位点,建立了吉生粳2号事件特异性定性PCR检测方法,该方法为转基因水稻吉生粳2号的身份识别提供了有效手段。
Abstract:
Using genome walking PCR, left flanking sequence of the T-DNA integration site on rice genome was am-plified. T-DNA integration site on rice genome was determined by nucleotide blast using left flanking sequence asquery. The results showed that T-DNA was inserted into the position 41 607 441 bp of chromosome 1(Gen Bank se-quence ID: NC008394.4). Right flanking sequence of the T-DNA integration site was also amplified by using T-DNA right border specific primers and right primer of insertion site. Based on the left flanking sequence and inser-tion site, the T-DNA left border specific primer and insertion site specific primers on‘Jishengjing 2’genome weredesigned. Using the primers, the event-specific detection PCR for‘Jishengjing 2’was established. It will providethe effective method for identification of‘Jishengjing 2’.