中国草原红牛HTR2A基因多态性及与肉质性状的相关性分析
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S823

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国家现代农业产业技术体系项目(CARS-37);吉林省重点科技研发项目(20180201039NY);吉林省创新平台项目(20200602052ZP)


Analysis of the Polymorphism of HTR2A Gene in Chinese Caoyuan Red Cattle and Its Correlation with Meat Quality Traits
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    摘要:

    以中国草原红牛为研究对象,通过PCR测序的方法对HTR2A基因5个外显子进行SNP筛查,发现外显子3第86bp处和第164 bp处分别存在S1、S2两个SNP位点,对应突变为g.C86G、g.G164A,卡方检验表明S1、S2位点均处于Hardy-Weinberg平衡状态。对检测到的两个SNP位点进行连锁不平衡分析,发现S1、S2位点间D'=0.794、r2=0.350,属于强连锁。两个位点(S1、S2)共形成H1(CG)、H2(GA)、H3(GG)、H4(CA)4种单倍型,单倍型频率分别为0.570、0.234、0.163、0.033。结合肉质性状进行连锁分析,发现单倍型组合H2H3个体对应的肌内脂肪含量极显著高于H3H3个体(P&l;0.01),显著高于H1H2、H1H3P&l;0.05),初步判断单倍型组合H2H3与肉牛肌内脂肪含量显著相关,可作为选育高肌内脂肪含量肉牛的参考标记。

    Abstract:

    The study took the Chinese caoyuan red cattle as the research object.The 5 exons of the HTR2A gene were screened for SNP by PCR sequencing.Only two SNPs,S1 and S2,were found at the 86 bp and 164 bp of exon 3 The corresponding mutations are g.C86G and g.G164A.Chi-square test shows that S1 and S2 are in HardyWeinberg equilibrium.The two detected SNP were analyzed for linkage disequilibrium,and it was found that between S1 and S2,D’=0.794,r2=0.350,which is a strong linkage.Two sites(S1,S2) formed four haplotypes H1(CG)H2(GA),H3(GG),H4(CA),and the haplotype frequencies were 0.570,0.234,0.163,0.033,respectively.Combined with meat quality traits for linkage analysis,it was found that the intramuscular fat content corresponding to the haplotype combination H2H3individuals was extremely significantly higher than that of the H3H3 individuals(P<0.01)significantly higher than H1H2,H1H3P<0.05),preliminary judgment of the haplotype combination H2H3 is significantly related to the intramuscular fat content of beef cattle,and can be used as a reference marker for breeding beef cattle with high intramuscular fat content.

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王思月,云巾宴,刘宇,肖成,赵玉民,吴健,曹阳.中国草原红牛HTR2A基因多态性及与肉质性状的相关性分析[J].东北农业科学,2023,48(6):96-100.

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  • 收稿日期:2021-03-03
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  • 在线发布日期: 2024-10-25
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