During the "14th Five-Year Plan" period, the construction of national ecological civilization will enter anew critical stage. Improving the level of ecological environment protection and further enhancing resource utilization have put forward stricter requirements for the development of rural household waste collection, transportationand disposal systems. The construction of rural solid waste collection and transportation system is the fundamentalguarantee for achieving waste resource utilization and harmless treatment, and is of great significance for promotingthe construction of beautiful rural areas. Based on the field survey data of rural domestic waste collection and transportation system from 37 counties（cities） of Jilin Province, this study used Data Envelopment Analysis（DEA） modelto analyze the comprehensive efficiency, pure technical efficiency and scale efficiency of rural domestic waste collection and transportation system of Jilin Province. We comprehensively evaluated the operation status and efficiency of rural domestic waste collection and transportation system of Jilin Province, identifying the existing problems and analyzing the causes. Corresponding countermeasures and suggestions were given in order to provide reference for the construction of the collection, transportation and disposal system of rural domestic waste in Jilin Province.